Visualize features spatially and interactively
ISpatialFeaturePlot( object, feature, image = NULL, slot = "data", alpha = c(0.1, 1) )
object | Seurat object |
---|---|
feature | Feature to visualize |
image | Name of the image to use in the plot |
slot | Which slot to pull expression data from? |
alpha | Controls opacity of spots. Provide as a vector specifying the min and max for SpatialFeaturePlot. For SpatialDimPlot, provide a single alpha value for each plot. |
Returns final plot as a ggplot object