In addition to the core Seurat package, we provide several extensions that enhance the functionality and utility of Seurat. A brief description of each is listed below with links to more complete documentation and examples.
Signac is an R toolkit that extends Seurat for the analysis, interpretation, and exploration of single-cell chromatin datasets. Currently in active development, the software supports the following features:
For documentation and vignettes, click here.
SeuratData is a mechanism for distributing datasets in the form of Seurat objects using R’s internal package and data management systems. It represents an easy way for users to get access to datasets that are used in the Seurat vignettes. For more information, click here.