Visualize features in dimensional reduction space interactively
IFeaturePlot(object, feature, dims = c(1, 2), reduction = NULL, slot = "data")
Arguments
- object
Seurat object
- feature
Feature to plot
- dims
Dimensions to plot, must be a two-length numeric vector specifying x- and y-dimensions
- reduction
Which dimensionality reduction to use. If not specified, first searches for umap, then tsne, then pca
- slot
Which slot to pull expression data from?
Value
Returns the final plot as a ggplot object