Boxplot of correlation of a variable (e.g. number of UMIs) with expression data — GroupCorrelationPlot • Seurat

Boxplot of correlation of a variable (e.g. number of UMIs) with expression data

GroupCorrelationPlot(
  object,
  assay = NULL,
  feature.group = "feature.grp",
  cor = "nCount_RNA_cor"
)

Arguments

object: Seurat object
assay: Assay where the feature grouping info and correlations are stored
feature.group: Name of the column in meta.features where the feature grouping info is stored
cor: Name of the column in meta.features where correlation info is stored

Value

Returns a ggplot boxplot of correlations split by group