Creates a plot of scatter plot of features across two single cells. Pearson correlation between the two cells is displayed above the plot.

CellScatter(
object,
cell1,
cell2,
features = NULL,
highlight = NULL,
cols = NULL,
pt.size = 1,
smooth = FALSE,
raster = NULL,
raster.dpi = c(512, 512)
)

## Arguments

object Seurat object Cell 1 name Cell 2 name Features to plot (default, all features) Features to highlight Colors to use for identity class plotting. Size of the points on the plot Smooth the graph (similar to smoothScatter) Convert points to raster format, default is NULL which will automatically use raster if the number of points plotted is greater than 100,000 Pixel resolution for rasterized plots, passed to geom_scattermore(). Default is c(512, 512).

A ggplot object

## Examples

data("pbmc_small")
CellScatter(object = pbmc_small, cell1 = 'ATAGGAGAAACAGA', cell2 = 'CATCAGGATGCACA')