Find subclusters under one cluster

FindSubCluster(
  object,
  cluster,
  graph.name,
  subcluster.name = "sub.cluster",
  resolution = 0.5,
  algorithm = 1
)

Arguments

object: An object
cluster: the cluster to be sub-clustered
graph.name: Name of graph to use for the clustering algorithm
subcluster.name: the name of sub cluster added in the meta.data
resolution: Value of the resolution parameter, use a value above (below) 1.0 if you want to obtain a larger (smaller) number of communities.
algorithm: Algorithm for modularity optimization (1 = original Louvain algorithm; 2 = Louvain algorithm with multilevel refinement; 3 = SLM algorithm; 4 = Leiden algorithm). Leiden requires the leidenalg python.

return a object with sub cluster labels in the sub-cluster.name variable