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Seurat
4.9.9.9039
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Seurat v5
Vignettes
Introductory Vignettes
PBMC 3K guided tutorial
Using Seurat with multi-modal data
Analysis of spatial datasets (Sequencing-based)
Analysis of spatial datasets (Imaging-based)
Data Integration
Introduction to scRNA-seq integration
Mapping and annotating query datasets
Fast integration using reciprocal PCA (RPCA)
Tips for integrating large datasets
Integrating scRNA-seq and scATAC-seq data
Multimodal reference mapping
New Statistical Methods
Weighted Nearest Neighbor Analysis
Mixscape Vignette
Using sctransform in Seurat
SCTransform, v2 regularization
Other
Data visualization vignette
Cell-cycle scoring and regression
Differential expression testing
Demultiplexing with hashtag oligos (HTOs)
Interoperability between single-cell object formats
Parallelization in Seurat with future
Dimensional reduction vignette
Seurat essential commands list
Seurat interaction tips
Merging Seurat objects
Extensions
FAQ
News
Reference
Archive
License
YEAR: 2021 COPYRIGHT HOLDER: Seurat authors
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