• Andrew Butler. Contributor.

  • Saket Choudhary. Contributor.

  • Charlotte Darby. Contributor.

  • Jeff Farrell. Contributor.

  • Isabella Grabski. Contributor.

  • Christoph Hafemeister. Contributor.

  • Yuhan Hao. Contributor.

  • Austin Hartman. Contributor.

  • Paul Hoffman. Contributor.

  • Jaison Jain. Contributor.

  • Longda Jiang. Contributor.

  • Madeline Kowalski. Contributor.

  • Skylar Li. Contributor.

  • Gesmira Molla. Contributor.

  • Efthymia Papalexi. Contributor.

  • Patrick Roelli. Contributor.

  • Rahul Satija. Author, maintainer.

  • Karthik Shekhar. Contributor.

  • Avi Srivastava. Contributor.

  • Tim Stuart. Contributor.

  • Kristof Torkenczy. Contributor.

  • Shiwei Zheng. Contributor.

  • Satija Lab and Collaborators. Funder.

Citation

Source: inst/CITATION

Hao et al. Dictionary learning for integrative, multimodal and scalable single-cell analysis. Nature Biotechnology (2023) [Seurat V5]

@Article{,
  author = {Yuhan Hao and Tim Stuart and Madeline H Kowalski and Saket Choudhary and Paul Hoffman and Austin Hartman and Avi Srivastava and Gesmira Molla and Shaista Madad and Carlos Fernandez-Granda and Rahul Satija},
  title = {Dictionary learning for integrative, multimodal and scalable single-cell analysis},
  journal = {Nature Biotechnology},
  year = {2023},
  doi = {10.1038/s41587-023-01767-y},
  url = {https://doi.org/10.1038/s41587-023-01767-y},
}

Hao and Hao et al. Integrated analysis of multimodal single-cell data. Cell (2021) [Seurat V4]

@Article{,
  author = {Yuhan Hao and Stephanie Hao and Erica Andersen-Nissen and William M. Mauck III and Shiwei Zheng and Andrew Butler and Maddie J. Lee and Aaron J. Wilk and Charlotte Darby and Michael Zagar and Paul Hoffman and Marlon Stoeckius and Efthymia Papalexi and Eleni P. Mimitou and Jaison Jain and Avi Srivastava and Tim Stuart and Lamar B. Fleming and Bertrand Yeung and Angela J. Rogers and Juliana M. McElrath and Catherine A. Blish and Raphael Gottardo and Peter Smibert and Rahul Satija},
  title = {Integrated analysis of multimodal single-cell data},
  journal = {Cell},
  year = {2021},
  doi = {10.1016/j.cell.2021.04.048},
  url = {https://doi.org/10.1016/j.cell.2021.04.048},
}

Stuart and Butler et al. Comprehensive Integration of Single-Cell Data. Cell (2019) [Seurat V3]

@Article{,
  author = {Tim Stuart and Andrew Butler and Paul Hoffman and Christoph Hafemeister and Efthymia Papalexi and William M Mauck III and Yuhan Hao and Marlon Stoeckius and Peter Smibert and Rahul Satija},
  title = {Comprehensive Integration of Single-Cell Data},
  journal = {Cell},
  year = {2019},
  volume = {177},
  pages = {1888-1902},
  doi = {10.1016/j.cell.2019.05.031},
  url = {https://doi.org/10.1016/j.cell.2019.05.031},
}

Butler et al. Integrating single-cell transcriptomic data across different conditions, technologies, and species. Nat Biotechnol (2018) [Seurat V2]

@Article{,
  author = {Andrew Butler and Paul Hoffman and Peter Smibert and Efthymia Papalexi and Rahul Satija},
  title = {Integrating single-cell transcriptomic data across different conditions, technologies, and species},
  journal = {Nature Biotechnology},
  year = {2018},
  volume = {36},
  pages = {411-420},
  doi = {10.1038/nbt.4096},
  url = {https://doi.org/10.1038/nbt.4096},
}

Satija and Farrell et al. Spatial reconstruction of single-cell gene expression data. Nat Biotechnol (2015) [Seurat V1]

@Article{,
  author = {Rahul Satija and Jeffrey A Farrell and David Gennert and Alexander F Schier and Aviv Regev},
  title = {Spatial reconstruction of single-cell gene expression data},
  journal = {Nature Biotechnology},
  year = {2015},
  volume = {33},
  pages = {495-502},
  doi = {10.1038/nbt.3192},
  url = {https://doi.org/10.1038/nbt.3192},
}