Run Pan-human Azimuth annotation on the cloud¶

Run Pan-human Azimuth annotation on the cloud

Usage¶

CloudAzimuth(
  object = object,
  assay = "RNA",
  ip = "azimuthapi.satijalab.org",
  port = NULL,
  scheme = NULL,
  ...
)

Arguments¶

object:

Seurat object to annotate
assay:

Name of the assay to use (default: ‘RNA’)
ip:

Server hostname (default: ‘azimuthapi.satijalab.org’)
port:

Server port (default: NULL)
scheme:

Server URL scheme (default: ‘https’).
…:

Additional arguments for the API to pass to the model (see ANNotate function for details)

Value¶

Annotated Seurat object

Details¶

Use CloudAzimuth(object) for the public cloud service. The ip, port, and scheme arguments should not be set manually by users; the default values follow standard use.