Index A | C | E | F | I | M | N | P | Q | R | U | X A annotate() (in module panhumanpy.ANNotate) annotate_core() (in module panhumanpy.ANNotate) azimuth_embed() (panhumanpy.ANNotate.AzimuthNN method) azimuth_embed_and_umap() (panhumanpy.ANNotate.AzimuthNN method) azimuth_refine() (panhumanpy.ANNotate.AzimuthNN method) azimuth_umap() (panhumanpy.ANNotate.AzimuthNN method) AzimuthNN (class in panhumanpy.ANNotate) AzimuthNN_base (class in panhumanpy.ANNotate) C calibrate_predictions() (panhumanpy.ANNotate.AzimuthNN_base method) cells_meta (panhumanpy.ANNotate.AzimuthNN attribute) (panhumanpy.ANNotate.AzimuthNN_base attribute) E embeddings (panhumanpy.ANNotate.AzimuthNN attribute) (panhumanpy.ANNotate.AzimuthNN_base attribute) F features_meta (panhumanpy.ANNotate.AzimuthNN_base attribute) I inference_embeddings_and_umap() (panhumanpy.ANNotate.AzimuthNN_base method) inference_model_embeddings() (panhumanpy.ANNotate.AzimuthNN_base method) inference_model_umaps() (panhumanpy.ANNotate.AzimuthNN_base method) M map_to_cell_ontology() (panhumanpy.ANNotate.AzimuthNN_base method) module panhumanpy.ANNotate N num_cells (panhumanpy.ANNotate.AzimuthNN_base attribute) P pack_adata() (panhumanpy.ANNotate.AzimuthNN_base method) panhumanpy.ANNotate module process_outputs() (panhumanpy.ANNotate.AzimuthNN_base method) process_query() (panhumanpy.ANNotate.AzimuthNN_base method) processed_outputs (panhumanpy.ANNotate.AzimuthNN_base attribute) Q query (panhumanpy.ANNotate.AzimuthNN_base attribute) query_adata() (panhumanpy.ANNotate.AzimuthNN_base method) query_features (panhumanpy.ANNotate.AzimuthNN_base attribute) query_h5ad() (panhumanpy.ANNotate.AzimuthNN_base method) query_stripped() (panhumanpy.ANNotate.AzimuthNN_base method) R refine_labels() (panhumanpy.ANNotate.AzimuthNN_base method) run_inference_model() (panhumanpy.ANNotate.AzimuthNN_base method) U umaps (panhumanpy.ANNotate.AzimuthNN attribute) (panhumanpy.ANNotate.AzimuthNN_base attribute) update_cells_meta() (panhumanpy.ANNotate.AzimuthNN_base method) X X_query (panhumanpy.ANNotate.AzimuthNN_base attribute)