Find accessible peaks in a set of cells
AccessiblePeaks(
object,
assay = NULL,
idents = NULL,
cells = NULL,
min.cells = 10
)| object | A Seurat object |
|---|---|
| assay | Name of assay to use |
| idents | A set of identity classes to find accessible peaks for |
| cells | A vector of cells to find accessible peaks for |
| min.cells | Minimum number of cells with the peak accessible (>0 counts) for the peak to be called accessible |
Returns a vector of peak names